Library Guides: CHM 453/454: Biochemistry: Data & Techniques

Proteins

RCSB Protein Data Bank
Has tools and other resources for exploring this worldwide repository of 3D structural data. More help on using this resource. Provided by the Research Collaboratory for Structural Bioinformatics (RCSB).
National Center for Biotechnology Information (NCBI)
Gateway to a suite of databases and tools for exploring structures and sequences of genes and proteins.
ExPASy: Bioinformatics Resource Portal
ExPASy (Expert Protein Analysis System) provides access to databases and software tools in proteomics, genomics, phylogeny, systems biology, population genetics, transcriptomics, etc. Hosted by the Swiss Institute of Bioinformatics [SIB].
Proteopedia
Proteopedia is a tool for sharing knowledge about the structure and function of proteins, DNA, and other macromolecules on the web, developed by scientists at the Weizmann Institute of Science in Israel. See the Video Guide for more help.
PubMed Protein
A collection of protein sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB. See How Tos for more help.
foldit
Have fun, while learning and contributing to science, by solving protein folding puzzles.

Pymol: Molecular Graphics System
Requires registration, but is free for educational use.

ChemSketch
Freeware for drawing molecules.

Biochemical Pathways (interactive map from Roche)